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- Calculates metrics of proportionality using the logit-normal multinomial model. It can also provide empirical and plugin estimates of these metrics.
MDiNE (Microbiome Differential Network Estimation)
- Bayesian model to estimate precision matrix based network changes with respect to a binary covariate.
MiCoRe (Microbiome Covariance Regresion)
- Bayesian model to estimate covariance matrix changes with respect to a covariate profile in microbiome data.